BioSmalltalk

Introduction Recently we published in the Animal Journal, an article analyzing Bovine Lymphocyte antigen (BoLA) region of the Brangus catt...

The rehh (Relative Extended Haplotype Homozygosity) R package provides several scores for detecting recent natural positive selection taki...

Introduction One of the latest additions in BioSmalltalk is a wrapper for running the well-known ShapeIt2 software (actually is ShapeIt v2...

PhyloclassTalk, an open-source phylogeographic text-mining system based in BioSmalltalk, was used in veterinary forensics to solve a homicid...

Contents of this post does not require to load or install BioSmalltalk or PhyloclassTalk, but uses a plain Pharo image with the FastTable ...

I have created the BioSmalltalk repository in GitHub so you can clone and contribute from there. I hope this will make it easy for intere...

Let's write plain Smalltalk code to download the Human chromosome 22 FASTA from the NCBI servers (about 9,6 Mbytes gzip compressed) | c...

Introduction Arlequin is a famous software for population genetics data analysis. The file format is well documented in the Arlequi...

In this post I want to present a preview of PhyloclassTalk , an application for phylogenetics analysis using the BioSmalltalk environment ...

Time to talk about the new 0.4 release . BioSmalltalk virtual-images include basic developement libraries for doing bioinformatics, for exa...